SubtiBank SubtiBank
ymxH [2018-02-10T12:26:45.000Z]
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ymxH [2018-02-10T12:26:45.000Z]

sporulation protein
locus
BSU16720
pI
5.44
mw
9.63 kDa
protein length
85 aa Sequence Blast
gene length
255 bp Sequence Blast
function
unknown
product
sporulation protein
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    1,743,924 → 1,744,181

    Phenotypes of a mutant

  • a ''[gene|1D27C5E73571A737B80649BFCF517C5FF136DFFF|ylmC] [gene|AC541AB15B4A2BC345B471BD654299BAEC3E8635|ymxH]'' double mutant has a severe [SW|sporulation] defect (1% [SW|sporulation] as compared to the wild type or single mutants), the block is at stage III of [SW|sporulation] [Pubmed|23396918]

    • The protein

    Paralogous protein(s)

  • [protein|1D27C5E73571A737B80649BFCF517C5FF136DFFF|YlmC]

    • Expression and Regulation

    Operons

    genes
    [gene|AC541AB15B4A2BC345B471BD654299BAEC3E8635|ymxH]
    description
    [Pubmed|22383849,8098035]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|22383849,14523133], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

    • regulation

  • expressed early during [SW|sporulation] in the mother cell ([protein|search|SigE]) [Pubmed|22383849,14523133]
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    Biological materials

    Mutant

  • BKE16720 (Δ[gene|AC541AB15B4A2BC345B471BD654299BAEC3E8635|ymxH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE16720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTGTCACCCCCTTGT, downstream forward: _UP4_TAAATAGCCCAATTGACTGT
  • BKK16720 (Δ[gene|AC541AB15B4A2BC345B471BD654299BAEC3E8635|ymxH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTGTCACCCCCTTGT, downstream forward: _UP4_TAAATAGCCCAATTGACTGT

    • References

  • 8098035,23123912,22383849,14523133